Originalartikel:
Frommholz D., Kusch P., Blavid R., Scheer H., Tu J.M., Marcus K., Zhao K.H., Atemnkeng V., Marciniak J., Kaiser A.E., Completing the hypusine pathway in Plasmodium, FEBS J. 2009, Epub ahead of print
Tribl F. ,Asan E. , Arzberger T. , Tatschner T. , Meyer H.E. , Bringmann G. , Riederer P. , Gerlach M. & Marcus K., Identification of L-ferritin in neuromelanin granules of the human substantia nigra – a targeted proteomics approach, eingereicht bei MCP
Sitek B., Sipos B., Alkatout I., Poschmann G., Stephan C., Schulenborg T., Marcus K., Lüttges J., Dittert D.D., Baretton D., Schnmiegel W., Hahn S.A., Klöppel G., Meyer H.E., Stühler K., Analysis of the Pancreatic Tumor Progression by a Quantitative Proteomic approach and Im-munhistochemical Validation, J Prot Res, im Druck
Bell A.W., Deutsch E.W., Au C.E., Kearney R.E., Beavis R., Sechi S., Nilsson T., Bergeron J.J.; HUPO Test Sample Working Group, Beardslee T.A., Chappell T., Meredith G., Sheffield P., Gray P., Hajivandi M., Pope M., Predki P., Kullolli M., Hincapie M., Hancock W.S., Jia W., Song L., Li L., Wei J., Yang B., Wang J., Ying W., Zhang Y., Cai Y., Qian X., He F., Meyer H.E., Ste-phan C., Eisenacher M., Marcus K., Langenfeld E., May C., Carr S.A., Ahmad R., Zhu W., Smith J.W., Hanash S.M., Struthers J.J., Wang H., Zhang Q., An Y., Goldman R., Carlsohn E., van der Post S., Hung K.E., Sarracino D.A., Parker K., Krastins B., Kucherlapati R., Bourassa S., Poirier G.G., Kapp E., Patsiouras H., Moritz R., Simpson R., Houle B., Laboissiere S., Me-talnikov P., Nguyen V., Pawson T., Wong C.C., Cociorva D., Yates Iii J.R., Ellison M.J., Lopez-Campistrous A., Semchuk P., Wang Y., Ping P., Elia G., Dunn M.J., Wynne K., Walker A.K., Strahler J.R., Andrews P.C., Hood B.L., Bigbee W.L., Conrads T.P., Smith D., Borchers C.H., Lajoie G.A., Bendall S.C., Speicher K.D., Speicher D.W., Fujimoto M., Nakamura K., Paik Y.K., Cho S.Y., Kwon M.S., Lee H.J., Jeong S.K., Chung A.S., Miller C.A., Grimm R., Williams K., Dorschel C., Falkner J.A., Martens L., Vizcaíno J.A. (2009) A HUPO test sample study reveals common problems in mass spectrometry-based proteomics. Nat Methods. 2009 May 17 [Epub ahead of print]
Langenfeld E., Zanger U.M., Meyer H.E., Marcus K., Absolute quantification of cytochrome p450 2D6 in human liver microsomes – validation of a mass spectrometry based quantification strategy, J Prot Res, 2009, 9 (9), 2313-2323
Redlich G., Zanger U.M., Riedmaier S., Bache N., Giessing A.B.M., Eisenacher M., Stephan C., Meyer H.E., Jensen O.N., Marcus K., Distinction between human Cytochrome P450 (CYP) iso-forms and identification of new phosphorylation sites by mass spectrometry, J Prot Res, 2008, 7(11), 4678-4688
Müller T., Jung K., Ullrich A., Schrötter A., Meyer H.E., Stephan C., Egensperger R., Marcus K., Disease state, age, sex, and post-mortem time-dependent expression of proteins in AD vs. control frontal cortex brain samples, Curr Alz Res, 2008, 85 (4), 393-406
Helling S., Vogt S., Rhiel A., Ramzan R., Wen L., Kadenbach B.* & Marcus K.*, Phosphoryla-tion and kinetics of mammalian cytochrome c oxidase, MCP, 2008, 7(9), 1714-1724
Kohl M.* & Redlich G.*, Eisenacher M., Schnabel A., Meyer H.E., Marcus K.* & Stephan C.*, Automated calculation of unique peptide sequences for unambiguous identification of highly homologous proteins by mass spectrometry, J Prot & Bioinf., 2008, 1(1), 8-14
Tribl F. & Lohaus C., Dombert T., Langenfeld E., Piechura H., Warscheid B., Meyer H.E., Marcus K., Towards multi-dimensional liquid chromatography separation of proteins using fluorescence and isotope-coded protein labeling for quantitative proteomics, Proteomics, 2008 (8), 1204-1211
Bode M., Irmler M., Friedenberger M., May C., Jung K., Stephan C., Meyer H.E., Lach C., Hillert R., Krusche A., Beckers J., Marcus K., Schubert W., Interlocking transcriptomics, proteomics and toponomics technologies for brain tissue analysis in murine hippocampus, Proteomics, 2008 (8), 1170-1178
Schuchhardt J., Glintschert A., Hartl D., Irmler M., Beckers J., Stephan C., Marcus K., Klose J., Meyer H.E., Malik A., BrainProfileDB – a platform for integration of functional genomics data, Proteomics, 2008 (8), 1162-1164
Hamacher M., Hardt T., van Hall A., Stephan C., Marcus K., Meyer H.E., Inside SMP proteo-mics: Six years German Human Brain Proteome Project (HBPP) - A summary, Proteomics, Proteomics. 2008 (8), 1118-1128
Marcus K., Schäfer H., Klaus S., Bunse C., Swart R., Meyer H.E., A new fast method for nanoLC-MALDI-TOF/TOF-MS analysis using monolithic columns for peptide preconcentration and separation in proteomic studies, J Prot Res, 2007 (6), 636-64
Lohaus C., Nolte A., Blüggel M., Scheer C., Klose J., Gobom J., Schüler A., Wiebringhaus T., Meyer H.E., Marcus K., Multi-dimensional chromatography – A powerful tool for the analysis of membrane proteins in mouse brain, J Prot Res, 2007 (6), 105-113
Schaefer H., Chamrad D.C., Herrmann M., Stuwe J., Becker G., Klose J., Blueggel M., Meyer H.E., Marcus K., Study of posttranslational modifications in lenticular aA-Crystallin of mice using proteomic analysis techniques, BBA, 2006 (1764(12)), 1948-1962
Stühler K., Pfeiffer K., Joppich C., Stephan C., Jungn K., Schmidt O., van Hall A., Hamacher M., Meyer H.E., Marcus K., Pilot study of the Human Proteome Organisation Brain Proteome Project: Applying different 2-DE techniques to monitor proteomic changes during murine brain development, Proteomics, 2006 (18), 4899-4913
Reidegeld K.A., Müller M., Stephan C., Blüggel M., Hamacher M., Martens L., Körting G., Chamrad D.C., Parkinson D., Apweiler R., Meyer H.E., Marcus K., The Power of Cooperative Investigation: Summary and Comparison of the HUPO Brain Proteome Project Pilot Studies Results, Proteomics, 2006 (18), 4997-5014
Stephan C., Reidegeld K.A., Hamacher M., van Hall A., Marcus K. et al., Automated reprocessing pipeline for searching heterogenic data of the HUPO Brain Proteome Project pilot phase, Proteomics, 2006 (18), 5015-5029
Dowsey A.W., English J., Pennington K., Cotter D., Stuehler K., Marcus K., Meyer H.E., Dunn M.J., Yang G.Z., Examination of two-dimensional gel electrophoresis in the HBPP pilot studies with the new RAIN image-based gel matching technique, Proteomics, 2006 (18), 5030-5047
Chamrad D., Körting G., Schäfer H., Stephan C., Thiele H., Apweiler R., Meyer H.E., Marcus K., Blüggel M., Gaining knowledge from previously unexplained spectra – application of the PTM-Explorer software to detect PTM in HUPO BPP MS/MS data, Proteomics, 2006 (18), 5048-5058
Mueller M., Martens L., Reidegeld K.A., Hamacher M., Stephan C., Bluggel M., Korting G., Chamrad D., Scheer C., Marcus K., Meyer H.E., Apweiler R., Functional annotation of proteins identified in human brain during the HUPO Brain Proteome Project pilot study, Proteomics, 2006 (18), 5059-5075
Helling S., Schmitt E., Joppich C., Schulenborg T., Müllner S., Felske-Müller S., Wiebringhaus T., Becker G., Linsenmann G., Sitek B., Lutter P., Meyer H.E., Marcus K., Two-dimensional differential membrane proteome analysis (2D-C/S-satDIGE) of scarce protein samples, Proteomics, 2006 (16), 4506-4513
Tribl F., Marcus K., Meyer H.E., Bringmann G., Gerlach M., Riederer P., Subcellular proteomics reveals neuromelanin granules to be a lysosome-related organelle, J Neural Transm., 2006 (113(6)), 741-749
Sanjua´n Szklarz L.K., Guiard B., Rissler M., Wiedemann N., Kozjak V., van der Laan M., Lo-haus C., Marcus K., Meyer H.E., Chacinska A., Pfanner N., Meisinger C., Inactivation of the Mitochondrial Heat Shock Protein Zim17 Leads to Aggregation of Matrix Hsp70s Followed by Pleiotropic Effects on Morphology and Protein Biogenesis, J Mol Biol, 2005 (351(1)), 206-218
Tribl F., Gerlach M., Marcus K., Asan E., Tatschner T., Arzberger T. Meyer H.E., Bringmann G., Riederer P., Subcellular proteomics of neuromelanin granules isolated from the human brain, Mol Cell Proteomics, 2005 (7), 945-957
Sitek B., Lüttges J., Marcus K., Kloeppel G., Schmiegel W., Meyer H.E., Hahn S. A., Stuehler K., Application of DIGE saturation labelling for the analysis of microdissected precursor lesions of pancreatic adenocarcinoma, Proteomics, 2005 (10), 2665-2679
Schaefer H., Chamrad D.C., Marcus K., Reidegeld K.A., Blüggel M., Meyer H.E., Tryptic transpeptidation products observed in proteome analysis by LC-MS/MS, Proteomics, 2005 (5), 846-852
Keicher C., Gambaryan S., Schulze E., Marcus K., Meyer H.E., Butt E., Phosphorylation of mouse LASP-1 on threonine 156 by cAMP- and cGMP-dependent protein kinase, Biochem Biophys Res Commun, 2004 (324), 308-316
Schaefer H., Meyer H.E., Bunse C., Joppich C., Chervet J.P., Marcus K., A peptide pre-concentration approach for nano-HPLC to diminish memory effects, Proteomics, 2004 (9), 2541-2544
Hamacher M., Klose J., Rossier J., Marcus K., Meyer H.E., Does understanding the brain need proteomics and does understanding proteomics need brains?--Second HUPO HBPP Workshop hosted in Paris, Proteomics, 2004 (7), 1932-1934
Chelobanov B.P., Laktionov P.P., Kharkova M.V., Rykova E.Y., Pyshnyi D.V., Pyshnaya I.A., Marcus K., Meyer H.E., Vlassov V.V., Interaction of keratin k1 with nucleic acids on the cell surface, Biochemistry (Mosc)., 2003 (68(11)), 1239-1246
Laktionov P.P., Chelobanov B.P., Kharkova M.V., Rykova E.Y., Pyshnyi D.V., Pyshnaya I.A., Marcus K., Meyer H.E., Vlassov V.V., Cell surface oligonucleotide-binding proteins of human squamous carcinoma A431 cells, Nucleosides Nucleotides Nucleic Acids., 2003 (22(5-8)), 1715-1719
Shi Y., Kotlyarov A., Laaß K., Gruber A.D., Butt E., Marcus K., Meyer H.E., Friedrich A., Volk H.-D., Gaestel M., Ablation of Protein Kinase MK5/PRAK Activity by Targeted Homologous Re-combination, Mol. Cell. Biol., 2003 (23), 7732-7741
Gambaryan S., Smolenski A., Butt E., Marcus K., Glazowa M., Palmetshofer A., Guillon G., Lohmann S., Walter U., cGMP-dependent protein kinase type II regulates basal level of aldosterone release in zona glomerulosa cells without activating STaR gene expression, J. Biol. Chem., 2003 (278), 29640-29648
Hirako Y., Nishizawa Y., Sitaru C., Opitz A., Marcus K., Butt-Dörje E., Meyer H.E., Owaribe K., Zillikens D., The 97 kDa (LABD97) and 120 kDa (LAD-1) Fragments of Type XVII Collagen Have Different N-Termini, J. Invest. Dermatol., 2003 (121), 1554-1556
Schaefer H., Marcus K., Sickmann A., Herrmann M., Klose J., Meyer H.E., Identification of phosphorylation and acetylation sites in alphaA-crystallin of eye lenses (mus musculus) after two-dimensional gel electrophoresis, Anal. Bioanal. Chem., 2003 (276), 966-972
Marcus K., Moebius J., Meyer H.E., Differential analysis of the phosphorylated proteins in resting and Thrombin-stimulated human platelets, Anal. Bioanal. Chem., 2003 (276), 973-993
Butt E., Gambaryan S., Göttfert N., Marcus K., Meyer H.E., Actin binding of human LIM and SH3 protein (LASP) is regulated by cGMP- and cAMP-dependent protein kinase phosphorylation on Ser-146, J. Biol. Chem., 2003 (278(18)), 15601-15607
Kraemer D.M., Strizek B., Meyer H. E., Marcus K., Drenckhahn D., Kidney Na+,K+-ATPase is associated with moesin, Eur. J. Cell. Biol., 2003 (82), 87-92
Vogel A., Borchers T., Marcus K., Meyer H.E., Krebs B., Spener F., Heterologous expression and characterization of recombinant purple acid phosphatase from red kidney bean, Arch. Bio-chem. Biophys., 2002 (401(2)), 164-172
Klose J., Nock C., Herrmann M,. Stuhler K., Marcus K., Bluggel M., Krause E., Schalkwyk L.C., Rastan S., Brown S.D., Bussow K., Himmelbauer H., Lehrach H., Genetic analysis of the mouse brain proteome, Nat. Genet., 2002 (30(4)), 385-393
Sickmann A., Marcus K., Schafer H., Butt-Dorje E., Lehr S., Herkner A., Suer S., Bahr I., Meyer H.E., Identification of post-translationally modified proteins in proteome studies, Electropho-resis, 2001 (22), 1669-1676
Marcus K., Immler D., Sternberger J., Meyer H.E., Identification of platelet proteins separated by two-dimensional gel electrophoresis and analyzed by matrix assisted laser desorption/ionization-time of flight-mass spectrometry and detection of tyrosine-phosphorylated proteins, Electrophoresis, 2000 (13), 2622-2636
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Prof. Dr. Katrin Marcus
